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Sequence View

View and export sequences for an a set of entries.

This tool is useful for exporting sequences for a set of entries in a defined format. These could be used for outside evaluation, material ordering, ELN population, etc.

Accessing the Tool

Select at least one antibody in the Project View. Go to the Export menu and select Sequence. This will open the Sequence View workspace in a new tab.

Sequence View

Using the Tool

  • Format: Select the format for the sequences (FASTA, FASTA (2-Line), GenBank, EMBL, IMGT, PIR, Tabular).
  • Line Length: Select the line length for the sequences. Some formats have set line lengths.
  • Trim to Fv: Check the "Trim to Fv" box to trim the sequences to the Fv region.
  • Export Sequences: Export the sequences using the defined format. The sequence text may also be copied directly.

References